Ccch gene family

Author: pdai

August undefined, 2024

WebMay 29, 2014 · Genes in the CCCH family encode zinc finger proteins containing a motif with three cysteines and one histidine. They play important roles in plant growth and development, and in response to biotic and abiotic stresses. WebArginine-rich Tandem Zinc Finger (RR-TZF) proteins make up a plant-specific superfamily that participates in plant development, while their roles in cotton fiber development remain to be explored. In this study, we identified an RR-TZF protein-coding gene, GhTZF2, containing two CCCH domains (C-X7-C-X5-C-X3-H-X16-C-X5-C-X4-C-X3-H) and one …

Genome-wide analysis of the CCCH zinc finger family in longan ...

WebMar 15, 2024 · Phylogenetic analysis categorized the barley CCCH genes (HvC3Hs) into eleven subfamilies according to their distinct features, and this classification was … WebJul 12, 2024 · The CCCH zinc finger is a group of proteins characterised by a typical motif consisting of three cysteine residues and one histidine residue. These proteins have been reported to play important roles in regulation of plant growth, developmental processes and environmental responses. In the present study, genome wide analysis of the CCCH … cj7 retro radio

CCCH protein-PvCCCH69 acted as a repressor for leaf senescence ... - Nature

WebJul 6, 2012 · A total of 68 CCCH genes ( ZmC3H1 - 68) were identified in maize and divided into seven groups by phylogenetic analysis. These 68 genes were found to be unevenly … WebNov 1, 2024 · On the basis of a typical CCCH motif (PF00642 and Sm00356) in members of the C3H gene family (Chai et al., 2012; Peng et al., 2012; Zhang et al., 2013; Liu et al., 2014; Xu, 2014; Pradhan et al., 2024), we identified 88 TaC3H genes in common wheat, named TaC3H1–TaC3H88 (Table 1). WebNov 1, 2014 · The CCCH-type (C3H-type) zinc finger (Znf) proteins are specific transcriptional factors containing a typical motif with three cysteine residues and one histidine residue. Increasing evidence suggests that members of this family play important roles in many biological processes functioning in RNA processing as RNA-binding proteins. cj8 jeep 1982

Comprehensive analysis of CCCH-type zinc finger gene family in …

Comprehensive analysis of CCCH zinc finger family in poplar

WebFeb 25, 2015 · CCCH gene family analysis facilitated functional gene discovery CCCH type Znf proteins share an ancient origin which now can be found in both … WebJan 5, 2013 · Among the different types of zinc finger proteins, the CCCH proteins are a large family containing 1–6 copies of CCCH-type motifs. A genome-wide analysis of the CCCH gene family identified a total of 68, 67, 68, and 91 CCCH genes in Arabidopsis, Oryza sativa (Wang et al. 2008), maize (Peng et al. 2012), and Populus (Chai et al. 2012 ... cj8000 japanese spongeWebNov 1, 2014 · The large number of gene duplication events that occurred in the C3H gene family in grapevine (Fig. 5, Supplemental Table S4), resulting in the expansion of this … cja 1988 s.40

"WebThe CCCH-type zinc finger proteins comprise a large gene family of regulatory proteins and are widely distributed in eukaryotic organisms. The CCCH proteins have been implicated in multiple biological processes and environmental responses in plants. " - Ccch gene family

Ccch gene family

Systematic analysis of CCCH zinc finger family in

WebJun 9, 2013 · A total of 34 CCCH Znf genes were identified in the latest M. truncatula genome sequence. The 34 predicted members were clustered into nine subfamilies based on their phylogenetic analysis and structure features. In addition, the 34 Medicago CCCH Znf genes were found to be unevenly distributed on eight chromosomes. WebJul 7, 2024 · CCCH is a subfamily of zinc finger proteins involved in plant growth, development, and stresses response. The function of CCCH in regulating leaf senescence, especially its roles in abscisic...

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WebMay 29, 2014 · Gene structure and protein motif analysis of the CCCH genes. To explore the gene structures of the CCCH genes in tomato, we compared the predicted coding … WebDec 1, 2024 · Here, we present the genome-wide identification of the CCCH Zinc-Finger (CCCH-ZF) gene family in banana. We identified 89 CCCH-ZFP (MaZFP) genes and evaluated their phylogenetic...

Webthe PI range from 4.90 (DlC3H33) to 9.50 (DlC3H28). In addition, the number of CCCH motif of DlC3H gene family was the same as that in Arabidopsis and rice, which was range from 1 to 6. Finally, the

WebMar 15, 2024 · Phylogenetic analysis categorized the barley CCCH genes (HvC3Hs) into eleven subfamilies according to their distinct features, and this classification was … Web(Fig. 1C). Detailed information on the maize CCCH zinc finger family can be found in Table S2. To explore sequence characteristics of the most common zinc finger motifs in the maize CCCH gene family, we performed sequence alignments of 45 C-X 7-C-X 5-C-X 3-H motifs and 98 C-X 8-C-X 5-C-X 3-H motifs to generate sequence logos, which were

WebAug 6, 2008 · As a consequence of whole genome searching, totally 58 CCCH genes were identified in mouse and 55 in human. The family size of human and mouse CCCH genes is smaller than the size of CCCH gene …

WebGenome-wide identification of the CCCH gene family in rose ( Rosa chinensis Jacq.) reveals its potential functions. Article. Full-text available. Mar 2024; BIOTECHNOL BIOTEC EQ; Cai-hua Li; cj abbot\u0027sWebJan 27, 2008 · Compared with other gene families in Arabidopsis and rice, the CCCH gene family is one of the largest families in plant and includes diverse members with distinct specificities. As shown in Figure 5, the proteins containing C-X 7–8 -C-X 5 -C-X 3 -H motif constitute the largest groups in the CCCH zinc-finger family. cja avocatsWebDec 27, 2024 · Arabidopsis has 68 CCCH protein genes that are divided into 11 subfamilies [ 23 ]. AtC3H14 (At1G66810) and AtC3H15 … cj abdomen\u0027sWebThe MYB family is one of the largest and most important gene families, participating in the regulation of plant growth and development and response to abiotic stresses. Several MYB genes in potato that regulate anthocyanin synthesis and participate in abiotic stress responses have been identified. cj8 spark plug autobarnWebApr 13, 2024 · Zinc finger CCCH domain-containing protein 13 ... As a member of the dioxygenase AlkB family of proteins, FTO depends on Fe ... Weedon MN, Zeggini E, Freathy RM, Lindgren CM et al. A common variant in the fto gene is associated with body mass index and predisposes to childhood and adult obesity.Science. 2007 2007May … cja 2003 s101WebJul 6, 2012 · A total of 68 CCCH genes ( ZmC3H1 - 68) were identified in maize and divided into seven groups by phylogenetic analysis. These 68 genes were found to be unevenly distributed on 10 chromosomes with 15 segmental duplication events, suggesting that segmental duplication played a major role in expansion of the maize CCCH family. cj adjective\\u0027sWebNov 23, 2024 · Gene collinearity and duplication of CCCH in B. napus. Most CCCH orthologous genes in B. rapa and B. oleracea remain as homeologous gene pairs in B. napus.There are 24 collinearity CCCH gene pairs only in subgenome A, 16 collinearity CCCH gene pairs only in subgenome C, and 92 collinearity CCCH gene pairs between … cj8 xu06vu045/4zj3bp6g4tj4